:orphan:

.. _examples:

########
Examples
########

.. note::

   ``vreg`` is under construction. At this stage, the API may still change and 
   features may be deprecated without warning.


.. raw:: html

    <div class="sphx-glr-thumbnails">

.. thumbnail-parent-div-open

.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="This example illustrates coregistration by 3D translation. The moving volume  is a 3D magnetization transfer map and the static volume is a 3D mask covering  both kidneys. ">

.. only:: html

  .. image:: /generated/examples/images/thumb/sphx_glr_plot_3d_mask_translation_thumb.png
    :alt:

  :ref:`sphx_glr_generated_examples_plot_3d_mask_translation.py`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">3D translation: image to mask</div>
    </div>


.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="This examples illustrates how vreg can be used to slice 3D volumes in  different ways.">

.. only:: html

  .. image:: /generated/examples/images/thumb/sphx_glr_plot_reslicing_thumb.png
    :alt:

  :ref:`sphx_glr_generated_examples_plot_reslicing.py`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">Coronal, sagittal, axial and oblique</div>
    </div>


.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="This example illustrates some of the basic ideas underlying affine  transformations using in-slice rotations.">

.. only:: html

  .. image:: /generated/examples/images/thumb/sphx_glr_plot_2d_rotations_thumb.png
    :alt:

  :ref:`sphx_glr_generated_examples_plot_2d_rotations.py`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">In-slice rotations</div>
    </div>


.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="This example illustrates 2D to 3D coregistration using 3D translations">

.. only:: html

  .. image:: /generated/examples/images/thumb/sphx_glr_plot_3d_multislice_translation_t1_thumb.png
    :alt:

  :ref:`sphx_glr_generated_examples_plot_3d_multislice_translation_t1.py`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">Multislice 2D to 3D translation (T1)</div>
    </div>


.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="This example illustrates 2D to 3D coregistration using 3D translations">

.. only:: html

  .. image:: /generated/examples/images/thumb/sphx_glr_plot_3d_multislice_translation_t2_thumb.png
    :alt:

  :ref:`sphx_glr_generated_examples_plot_3d_multislice_translation_t2.py`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">Multislice 2D to 3D translation (T2*)</div>
    </div>


.. thumbnail-parent-div-close

.. raw:: html

    </div>


.. toctree::
   :hidden:

   /generated/examples/plot_3d_mask_translation
   /generated/examples/plot_reslicing
   /generated/examples/plot_2d_rotations
   /generated/examples/plot_3d_multislice_translation_t1
   /generated/examples/plot_3d_multislice_translation_t2



.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_